It is working fine for a while now.
First I have recreated manually only those items that were missing.
And now I have a small CLI tool, that allows for any future issues to be mitigated in one command 
[error] send error: TypeError: Object has been destroyed
It seems it is gone now.
Another thing that I noticed started popping after that is
[2021-10-07 23:04:42.425] [info] [watchDocker] Container: devkinsta_nginx, status: kill
[2021-10-07 23:04:52.492] [info] [watchDocker] Container: devkinsta_nginx, status: kill
[2021-10-07 23:04:52.544] [info] [watchDocker] Container: devkinsta_nginx, status: die
[2021-10-07 23:04:52.621] [info] [watchDocker] Container: devkinsta_nginx, status: stop
[2021-10-07 23:04:52.891] [info] [watchDocker] Container: devkinsta_nginx, status: start
[2021-10-07 23:04:52.892] [info] [watchDocker] Container: devkinsta_nginx, status: restart
[2021-10-08 18:32:11.609] [info] [watchDocker] Container: devkinsta_nginx, status: kill
[2021-10-08 18:32:21.657] [info] [watchDocker] Container: devkinsta_nginx, status: kill
[2021-10-08 18:32:21.762] [info] [watchDocker] Container: devkinsta_nginx, status: die
[2021-10-08 18:32:21.850] [info] [watchDocker] Container: devkinsta_nginx, status: stop
[2021-10-08 18:32:22.118] [info] [watchDocker] Container: devkinsta_nginx, status: start
[2021-10-08 18:32:22.119] [info] [watchDocker] Container: devkinsta_nginx, status: restart
[2021-10-08 18:33:47.902] [info] [watchDocker] Container: devkinsta_nginx, status: kill
[2021-10-08 18:33:57.949] [info] [watchDocker] Container: devkinsta_nginx, status: kill
[2021-10-08 18:33:57.977] [info] [watchDocker] Container: devkinsta_nginx, status: die
[2021-10-08 18:33:58.060] [info] [watchDocker] Container: devkinsta_nginx, status: stop
[2021-10-08 18:33:58.278] [info] [watchDocker] Container: devkinsta_nginx, status: start
[2021-10-08 18:33:58.279] [info] [watchDocker] Container: devkinsta_nginx, status: restart
[2021-10-08 18:45:38.928] [info] [watchDocker] Container: devkinsta_nginx, status: kill
[2021-10-08 18:45:48.987] [info] [watchDocker] Container: devkinsta_nginx, status: kill
[2021-10-08 18:45:49.036] [info] [watchDocker] Container: devkinsta_nginx, status: die
[2021-10-08 18:45:49.109] [info] [watchDocker] Container: devkinsta_nginx, status: stop
[2021-10-08 18:45:49.374] [info] [watchDocker] Container: devkinsta_nginx, status: start
[2021-10-08 18:45:49.375] [info] [watchDocker] Container: devkinsta_nginx, status: restart
[2021-10-08 18:47:31.442] [info] [watchDocker] Container: devkinsta_nginx, status: kill
[2021-10-08 18:47:41.495] [info] [watchDocker] Container: devkinsta_nginx, status: kill
[2021-10-08 18:47:41.521] [info] [watchDocker] Container: devkinsta_nginx, status: die
[2021-10-08 18:47:41.592] [info] [watchDocker] Container: devkinsta_nginx, status: stop
[2021-10-08 18:47:41.850] [info] [watchDocker] Container: devkinsta_nginx, status: start
[2021-10-08 18:47:41.851] [info] [watchDocker] Container: devkinsta_nginx, status: restart
[2021-10-09 13:29:24.649] [info] [watchDocker] Container: devkinsta_nginx, status: kill
[2021-10-09 13:29:34.698] [info] [watchDocker] Container: devkinsta_nginx, status: kill
[2021-10-09 13:29:34.749] [info] [watchDocker] Container: devkinsta_nginx, status: die
[2021-10-09 13:29:34.817] [info] [watchDocker] Container: devkinsta_nginx, status: stop
[2021-10-09 13:29:35.044] [info] [watchDocker] Container: devkinsta_nginx, status: start
[2021-10-09 13:29:35.046] [info] [watchDocker] Container: devkinsta_nginx, status: restart
[2021-10-09 13:31:06.624] [info] [watchDocker] Container: devkinsta_nginx, status: kill
[2021-10-09 13:31:16.670] [info] [watchDocker] Container: devkinsta_nginx, status: kill
[2021-10-09 13:31:16.699] [info] [watchDocker] Container: devkinsta_nginx, status: die
[2021-10-09 13:31:16.754] [info] [watchDocker] Container: devkinsta_nginx, status: stop
[2021-10-09 13:31:16.969] [info] [watchDocker] Container: devkinsta_nginx, status: start
[2021-10-09 13:31:16.970] [info] [watchDocker] Container: devkinsta_nginx, status: restart
[2021-10-09 13:31:30.839] [info] [watchDocker] Container: devkinsta_nginx, status: kill
[2021-10-09 13:31:40.891] [info] [watchDocker] Container: devkinsta_nginx, status: kill
[2021-10-09 13:31:40.917] [info] [watchDocker] Container: devkinsta_nginx, status: die
[2021-10-09 13:31:40.997] [info] [watchDocker] Container: devkinsta_nginx, status: stop
[2021-10-09 13:31:41.198] [info] [watchDocker] Container: devkinsta_nginx, status: start
[2021-10-09 13:31:41.199] [info] [watchDocker] Container: devkinsta_nginx, status: restart